It doesn't assume anything about humans - the argument is about aliens. Some people assume that advanced aliens would have to be benevolent just because they're advanced, but there isn't really much evidence to support that. It doesn't really matter if humans are "immoral logical monsters" or not, just that an alien race might well be.
The real assumption it makes is that futuristic weapons can wipe out a civilisation without any defences being possible and without leaving them the opportunity to strike back. This is much more questionable, and I personally think it probably isn't true. If we do accept that assumption though, then it makes a strong case against active SETI - where humans make an effort not just to detect alien races but to send out communications that unknown aliens might intercept.
In fact, even if we do consider humans, it seems quite possible that we'd pull the trigger in that situation. Humans aren't particularly benevolent towards non-human species, and when we are it's usually because we think they're 'cute' - usually because they have traits like big eyes etc that remind us of human children.
Imagine if we became sufficiently advanced to create relativistic warheads, but were largely still confined to a few planets. Imagine we then found out there was a nearby planet of aliens. Initial scans of their broadcast shows that they are a creature we consider almost instinctively disgusting - let's say they resemble cockroaches. Their behaviour also has some aspects that we don't understand, and that makes them confusing and unpredictable. Plus, they break some of our deeply held moral beliefs or cultural taboos - perhaps they practice regular infanticide, maybe they genocided another species that we consider intelligent, perhaps they keep another species that we consider cute, likable, or human-like as food and slaughter them in what we consider a cruel way, perhaps one of their genders violently subjugates the other(s) and routinely kills them in unpleasant sexual practices.
From analysing their broadcasts, we can't get full understanding of how they think or if they're likely to be aggressive towards us, but we do know that they act in a warlike and aggressive way towards each other and that they are very willing indeed to slaughter other species in vast numbers if it'll benefit them.
Luckily, the cockroach aliens are less developed than us. They don't have relativistic weapons and can't threaten earth. However, at their current rate of advancement our scientists believe in a century or so they will develop them.
The government has a choice. Send over a warhead and it'll wipe them out. They'll be rendered extinct and can never threaten earth. Alternatively, we could let them develop or even help them. In that case they're sure to discover us, sure to develop relativistic weapons, and sure to realise that we could develop such weapons and thus pose a threat to their existence.
Would they choose to wipe us out? They might. They're unpredictable and aggressive creatures, their governments often have periods of upheaval and even when stable are known to break treaties, many of them are xenophobic and violent towards outsiders even of their own kind, and it's not uncommon for individuals who are insane even by the confusing standards of their species to gain power.
So, does the human government spare them the baby-killing cockroaches and gamble with the very survival of the human race? What if there are many human governments with the technology to launch such warheads - do all of them spare the cockroaches? Does future Bush? Future Putin? Future Bashar al-Assad? Future Kim-Jong-Un? Future Hitler? All it takes is one of them to decide to attack.