That said, the statement of media bias in reporting is an extremely valid one. Mebbe it's just because I'm Australian (where this exact issue has been flavour of the month since that whole 'phonetapping, extortion and incredibly widespread corruption' thing in the UK and almost all our major media is owned by that same corporation) but yeah, while I'm not willing to accept what has been said by either party as completely true, I'm actually going to be more cynical regarding a for-profit organisation's reporting of an emotionally charged subject than that of some random on the internet.
The basic points he raised are valid; there are a crapload of perspectives on the issue which we should know are not being addressed (and many which could not be, without the article basically being a thesis on the matter) and the mainstream media has a long tradition of going after easy targets, then piling on hyperbole and emotion for the sake of ratings (Hell, Kent Brockman was created as a parody of this exact tendancy, "stories on supermarket prices and dogs with credit cards"). If 'charity fraud results in puppies suffering' isn't an emotionally charged subject, what the hell is?
News organisations using their influence to push the agenda of their owners/members isn't exactly unheard of, and there are alot of reasons for individuals/organisations to screw other individuals/organisations over. e.g. in Aus there's currently a major political scandal involving an MP who claims that his old union boss framed him for hiring hookers with union funds. The organisation brought in to assess the situation eventually returned that the MP had acted improperly. It later came out that the second in charge of that organisation is the husband of one of the involved parties in the scandal and if the MP's accusations are correct, would have used her influence to further incriminate the MP, to protect both her husband and herself (as his accusations involve her being responsible for a huge amount of fraud). Add to that the fact that the news organisations reporting on this matter have been accused of bias (as that MP being removed from parliament would force an election and a government less hostile to the News Limited corporation would stand a good chance of being elected)... You can see how these apparently simple matters can get amazingly complicated when more and more people start getting involved? By now the water's so muddied by hyperbole, accusations of lies and misconduct and competing interests that I doubt the objective truth is ever going to be found out, but hell if that's going to stop the media from reporting as if all the facts are in. After all, if there's an investigation going on, there must be SOME guilty party, right? So let's just shotgun some emotional turmoil in there, SOME of it must be true!
I'm not saying that there's no issue here and you should all move along, but also don't jump down the throat of the only guy who isn't joining the emotion bandwagon (even if he is being a dick about it) and look at this critically. I don't think many of us are taxation experts and neither are the journalists who cobbled together that article. Yes, the IRS is apparently conducting an investigation, but that does not guarantee anything untowards has happened, only that the possibility seems apparent from an outside perspective. We have no idea of the accounting tricks used by those organisations. Accountancy and Economics are tertiary degrees FOR A REASON. That shit ain't simple and there are a hell of alot of legit tricks you can use with your balance sheets to cut costs which on paper look like incredibly horrible decisions (throwing a pile of money into a debt, then recycling it through some other means isn't that much of a far-out trick) that work out in the end based on the taxation laws of the jurisdiction they're based in.
Let the investigation take place and use evidence from THAT before deciding that something has definitely happened. Maybe they're corrupt. Maybe they're stupid. Maybe the journalists who made this story are stupid and the real story is nothing like the 'PUPPIES BE SAD' one they've farted out in an afternoon. There's bugger all evidence in that article that can't be subjectively interpreted.